BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022G02LP1|AL427942
(424 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1300 815 0.0
3x_Contig1091 165 6e-41
>3x_Contig1300
Length = 6589
Score = 815 bits (410), Expect = 0.0
Identities = 420/422 (99%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 2 atttaagatacgatctgttctaagaaactcagcattcattgttgcatatttcttattgat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 atttaagatacgatctgttctaagaaactcagcattcattgttgcatatttcttattgat 822
Query: 62 gtatctggtaattcaaaccttaaacatcgattcttgttcttataataccgatgccctgtg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gtatctggtaattcaaaccttaaacatcgattcttgttcttataataccgatgccctgtg 882
Query: 122 cctcgctcggttgaatgtatctgaaactttcaatcttgagctggatggttaatgtttatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 cctcgctcggttgaatgtatctgaaactttcaatcttgagctggatggttaatgtttatt 942
Query: 182 gtacaattatgaattaacgaaacatttatgactaatgggccacatcgagttgacttcttt 241
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gttcaattatgaattaacgaaacatttatgactaatgggccacatcgagttgacttcttt 1002
Query: 242 tgagtacgaaaaggccctattttgaaatcaatgaccttgacccgtaattagaagttcaca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tgagtacgaaaaggccctattttgaaatcaatgaccttgacccgtaattagaagttcaca 1062
Query: 302 cattcttagatagtttaccagtagatgcctaatttggctcatagctttttagttgagaaa 361
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1063 cattcttagatagtttaccagtagatgcctaatttggctcatagcttttt-gttgagaaa 1121
Query: 362 caagggatcctcttctcaaccgcagcagtattcaaaaattatttgaaggattgatccagg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 caagggatcctcttctcaaccgcagcagtattcaaaaattatttgaaggattgatccagg 1181
Query: 422 tt 423
||
Sbjct: 1182 tt 1183
>3x_Contig1091
Length = 4701
Score = 165 bits (83), Expect = 6e-41
Identities = 168/195 (86%), Gaps = 1/195 (0%)
Strand = Plus / Minus
Query: 114 gccctgtgcctcgctcggttgaatgtatctgaaactttcaatcttgagctggatggttaa 173
||||||| ||||||||||||||| ||| || | |||||||||||||||||||||||||||
Sbjct: 2829 gccctgtacctcgctcggttgaacgtacctcacactttcaatcttgagctggatggttaa 2770
Query: 174 tgtttattgtacaattatgaattaacgaaacatttatgactaatgggccacatcgagttg 233
||||| || | | | || ||| ||| |||||||| |||| ||||||||| ||| | |||
Sbjct: 2769 tgtttgttattcgactacgaaccaacaaaacatttttgaccaatgggccatatcaatttg 2710
Query: 234 acttcttttgagtacgaaaaggccctattttgaaatcaatgaccttgacccgtaattaga 293
|||||||||||||||||||||||| | |||| ||||||||||||| | |||||||||||
Sbjct: 2709 acttcttttgagtacgaaaaggcctttctttg-aatcaatgaccttaaaccgtaattaga 2651
Query: 294 agttcacacattctt 308
|| ||||||| ||||
Sbjct: 2650 agctcacacactctt 2636
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3443
Number of Sequences: 1807
Number of extensions: 3443
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 2
length of query: 424
length of database: 10,358,551
effective HSP length: 16
effective length of query: 408
effective length of database: 10,329,639
effective search space: 4214492712
effective search space used: 4214492712
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)